How to install napari on your machine

Welcome to the napari installation guide!

This guide will teach you how to do a clean install of napari and launch the viewer.

Note

If you want to contribute code back into napari, you should follow the development installation instructions in the contributing guide instead.

Prerequisites

Prerequisites differ depending on how you want to install napari.

Prerequisites for installing napari as a Python package

This installation method allows you to use napari from Python to programmatically interact with the app. It is the best way to install napari and make full use of all its features.

It requires:

• Python >=3.8

• the ability to install python packages via pip OR conda-forge

You may also want:

• an environment manager like conda or venv (Highly recommended)

Prerequisites for installing napari as a bundled app

This is the easiest way to install napari if you only wish to use it as a standalone GUI app. This installation method does not have any prerequisites.

Click here to see instructions for installing the bundled app.

Install as Python package (recommended)

Python package distributions of napari can be installed via pip, conda-forge, or from source.

Important

While not strictly required, it is highly recommended to install napari into a clean virtual environment using an environment manager like conda or venv.

This should be set up before you install napari. For example, setting with up a Python 3.9 environment with conda:

conda create -y -n napari-env -c conda-forge python=3.9
conda activate napari-env

Choose one of the options below to install napari as a Python package.

1. From pip

napari can be installed on most macOS (Intel x86), Linux, and Windows systems with Python 3.8-3.10 using pip:

python -m pip install "napari[all]"

You can then upgrade napari to a new version using:

python -m pip install "napari[all]" --upgrade

(See Choosing a different Qt backend below for an explanation of the [all] notation.)

2. From conda-forge

If you prefer to manage packages with conda, napari is available on the conda-forge channel. We also recommend this path for users of arm64 macOS machines (Apple Silicon, meaning a processor with a name like “M1”). You can install it with:

conda install -c conda-forge napari pyqt

You can then upgrade to a new version of napari using:

conda update napari

If you want to install napari with PySide2 as the backend you need to install it using

conda install -c conda-forge napari pyside2

Note

In some cases, conda’s default solver can struggle to find out which packages need to be installed for napari. If it takes too long or you get the wrong version of napari (see below), consider:

1. Overriding your default channels to use only conda-forge by adding --override-channels and specifying the napari and Python versions explicitly. For example, use python=3.9 to get Python 3.9 and napari=0.4.18 to specify the napari version as 0.4.18, the current release.

2. Switching to the new, faster libmamba solver, by updating your conda (>22.11), if needed, and then installing and activating the solver, as follows:

conda update -n base conda
conda install -n base conda-libmamba-solver
conda config --set solver libmamba

3. Alternately, consider installing mamba in your base environment with conda install -n base -c conda-forge mamba. Then you can use mamba by replacing conda with mamba in the installation instructions, for example:

mamba install napari

3. From the main branch on Github

To install the latest version with yet to be released features from github via pip, call

python -m pip install "git+https://github.com/napari/napari.git#egg=napari[all]"

Checking it worked

After installation you should be able to launch napari from the command line by simply running

napari

An empty napari viewer should appear as follows.

Note

You can check the napari version, to ensure it’s what you expect, for example the current release 0.4.18, using command: napari --version .

Choosing a different Qt backend

napari needs a library called Qt to run its user interface (UI). In Python, there are two alternative libraries to run this, called PyQt5 and PySide2. By default, we don’t choose for you, and simply running python -m pip install napari will not install either. You might already have one of them installed in your environment, thanks to other scientific packages such as Spyder or matplotlib. If neither is available, running napari will result in an error message asking you to install one of them.

Running python -m pip install "napari[all]" will install the default framework, which is currently PyQt5–but this could change in the future. However, if you have a Mac with the newer arm64 architecture (Apple Silicon), this will not work–see note-m1.

To install napari with a specific framework, you can use:

python -m pip install "napari[pyqt5]"    # for PyQt5

# OR
python -m pip install "napari[pyside2]"  # for PySide2

Note

For arm64 macOS machines (Apple Silicon), pre-compiled PyQt5 or PySide2 packages (wheels) are not available on PyPI, the repository used by pip, so trying to pip install napari[all] or either of the variants above will fail. However, you can install one of those libraries separately, for example from conda-forge, and then use pip install napari.

Note

If you switch backends, it’s a good idea to pip uninstall the one you’re not using.

Install as a bundled app

napari can also be installed as a bundled app on each of the major platforms, MacOS, Windows, and Linux with a simple one-click download and installation process. You might want to install napari as a bundled app if you are unfamiliar with installing Python packages or if you were unable to get the installation process described above working. The bundled app version of napari is the same version that you can get through the above described processes, and can still be extended with napari plugins installed directly via the app.

Important

Note that the bundled app is still in active development, and may not be very stable. We strongly recommend installing as a Python package instead.

To access the cross platform bundles you can visit our release page and scroll to the release you are interested in. For example, the bundles for napari 0.4.18 can be accessed here. To get to the download link, just scroll all the way to bottom of the page and expand the Assets section. You can then download the appropriate file for your platform.

Next steps

• to start learning how to use napari, checkout our getting started tutorial

• if you are interested in contributing to napari please check our contributing guidelines

• if you are running into issues or bugs, please open a new issue on our issue tracker

  • include the output of napari --info (or go to Help>Info in the viewer and copy paste the information)

• if you want help using napari, we are a community partner on the imagesc forum and all usage support requests should be posted on the forum with the tag napari. We look forward to interacting with you there!

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