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napari workshop
Build your own workshop
How to deploy your workshop
How to open the notebooks in the cloud using mybinder.org
Getting started
Python setup & napari installation
Downloading and launching this workshop’s Jupyter notebooks
The napari application
napari Plugins
Notebooks
Bioimage visualization in Python
Interactive analysis with Jupyter notebook, napari, scikit-image, and scipy
Segmenting nuclei with the
stardist
napari plugin
Manual annotation
Using custom colormaps in napari
Alternative notebooks
Exploratory analysis: spot detection
From workflow to widget: customizing napari
Creating a napari plugin
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