napari 0.2.7#
We’re happy to announce the release of napari 0.2.7! napari is a fast, interactive, multi-dimensional image viewer for Python. It’s designed for browsing, annotating, and analyzing large multi-dimensional images. It’s built on top of Qt (for the GUI), vispy (for performant GPU-based rendering), and the scientific Python stack (numpy, scipy).
For more information, examples, and documentation, please visit our website: https://github.com/napari/napari
Highlights#
Play button for animating axes now in the GUI
Threshold slider for much improved isosurface rendering
Dockable widgets (!)
Slice information on sliders
Dramatically improved performance with many invisible layers
Adopted a Governance model with a mission and values statement
Added a new Core Dev guide
New Features#
Add governance model, mission and values, core dev guide (#655)
Improvements#
Iso-surface threshold slider (#712)
Add play button to GUI (#726)
Make layers list dockable (#727)
Add Zenodo badge to documentation (#743)
Add a dock icon (#744)
Show splash screen for cli launch (#745)
Add benchmarks for setting
.data
in Image layers (#747)Refactor layer tests to be more parametrized (#723)
Support opening labels layers via directly from path (#748)
Simplify keybindings info display (#749)
Clean up info box (#750)
Display slice info on right of slider (#759)
Block refresh for invisible layers (#776)
About copy button to info display box (#798)
Add blocked_signals context manager (#797)
Better selected menu header background color (#813)
Bug Fixes#
Fix StringEnum setting and errors (#757)
scale argument now accepts array-like input (#765)
fix
set_fps
type to float (#767)Add shutdown method to QtViewer that closes all resources (#769)
Change language around windows support in readme (#779)
Revert #784 console shutdown conditionals (#796)
Fix window raise & inactive menubar conflict (#795)
Change documentation on qt.py folder location (#783)
Updating qt_console with better resource management (#784)
Respect vispy max texture limits (#788)
Fix (minor) deprecation warnings (#800)
Fix FPS spin box on Qt < 5.12 (#803)
Bumpy vispy dependency to 0.6.4 (#807)
Set threshold for codecov failure (#806)
Rename util to utils in MANIFEST.in (#811)
Add
requirements/release.txt
with release dependencies (#809)
API Changes#
Rename util to utils across repo (#808)
Move Labels utility functions to labels_util.py (#770)
Move Image layer utility functions to image_utils.py (#775)
Move Layer utility functions to /napari/layers/layer_utils.py (#778)
Refactor util.misc (#781)
Drop ndim keyword from labels layer (#773)
7 reviewers added to this release (alphabetical)#
Ahmet Can Solak - @AhmetCanSolak
Juan Nunez-Iglesias - @jni
Kevin Yamauchi - @kevinyamauchi
Kira Evans - @kne42
Nicholas Sofroniew - @sofroniewn
Shannon Axelrod - @shanaxel42
Talley Lambert - @tlambert03