napari
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    • napari quick start
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    • Getting started with napari
    • napari viewer tutorial
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  • napari tutorials
    • Annotation
      • Annotating videos with napari
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      • Using Dask and napari to process & view large datasets
    • Segmentation
      • Annotating segmentation with text and bounding boxes
    • Tracking
      • Single cell tracking with napari
  • napari workshops
  • How-to guides
    • Using layers
      • Using the image layer
      • Using the labels layer
      • Using the points layer
      • Using the shapes layer
      • Using the surface layer
      • Using the tracks layer
      • Using the vectors layer
    • Hooking up your own events
    • napari + ImageJ how-to guide
    • Napari in Docker
    • Performance monitoring
  • In-depth explanations
    • Using magicgui in napari
    • An introduction to the event loop in napari
    • Multithreading in napari
    • 3D interactivity
    • Rendering in napari
    • Asynchronous rendering
    • napari performance
    • Preferences
    • Contexts and Expressions in napari
    • Events reference
  • Glossary
  • Gallery
    • Add image
    • Get current viewer
    • Add image transformed
    • Set theme
    • Interaction box image
    • Add volume
    • Add surface 2D
    • Add grayscale image
    • Scale bar
    • nD volume
    • Annotate 2D
    • nD image
    • nD surface
    • nD labels
    • Viewer FPS label
    • Multiple viewers
    • Image depth
    • magicgui viewer
    • Pass colormaps
    • Add multiscale image
    • Mixed dimensions labels
    • Surface normals wireframe
    • Cursor position
    • nD vectors image
    • Paint nD
    • Spherical points
    • nD multiscale image
    • Dask nD image
    • Layers
    • nD shapes with text
    • Interactive scripting
    • nD multiscale image non-uniform
    • Linked layers
    • nD points
    • Labels 2D
    • Swap dims
    • 3D Paths
    • Add vectors
    • Add labels
    • Add vectors image
    • Set colormaps
    • Reader plugin
    • New theme
    • Show points based on feature
    • Custom key bindings
    • napari without gui_qt
    • Add points
    • Points over time
    • Add points with text
    • nD vectors
    • Add shapes with text
    • Add vectors color by angle
    • Mouse drag callback
    • nD points with features
    • Tracks 3D with graph
    • Volume plane rendering
    • Tracks 2D
    • Add labels with features
    • Update console
    • nD shapes
    • Dynamic projections dask
    • magicgui parameter sweep
    • magicgui Image Arithmetic
    • Affine transforms
    • Cursor ray
    • Interactive move rectangle
    • Add points on nD shapes
    • Add shapes with features
    • Add points with features
    • Tracks 3D
    • Add shapes
    • Shapes to labels
    • Interaction box points
    • Custom mouse functions
    • Interactive move point
    • To screenshot
    • Annotate segmentation with text
    • Action manager
    • bbox annotator

Gallery¶

Examples of napari usage.

Add image

Add image¶

Get current viewer

Get current viewer¶

Add image transformed

Add image transformed¶

Set theme

Set theme¶

Interaction box image

Interaction box image¶

Add volume

Add volume¶

Add surface 2D

Add surface 2D¶

Add grayscale image

Add grayscale image¶

Scale bar

Scale bar¶

nD volume

nD volume¶

Annotate 2D

Annotate 2D¶

nD image

nD image¶

nD surface

nD surface¶

nD labels

nD labels¶

Viewer FPS label

Viewer FPS label¶

Multiple viewers

Multiple viewers¶

Image depth

Image depth¶

magicgui viewer

magicgui viewer¶

Pass colormaps

Pass colormaps¶

Add multiscale image

Add multiscale image¶

Mixed dimensions labels

Mixed dimensions labels¶

Surface normals wireframe

Surface normals wireframe¶

Cursor position

Cursor position¶

nD vectors image

nD vectors image¶

Paint nD

Paint nD¶

Spherical points

Spherical points¶

nD multiscale image

nD multiscale image¶

Dask nD image

Dask nD image¶

Layers

Layers¶

nD shapes with text

nD shapes with text¶

Interactive scripting

Interactive scripting¶

nD multiscale image non-uniform

nD multiscale image non-uniform¶

Linked layers

Linked layers¶

nD points

nD points¶

Labels 2D

Labels 2D¶

Swap dims

Swap dims¶

3D Paths

3D Paths¶

Add vectors

Add vectors¶

Add labels

Add labels¶

Add vectors image

Add vectors image¶

Set colormaps

Set colormaps¶

Reader plugin

Reader plugin¶

New theme

New theme¶

Show points based on feature

Show points based on feature¶

Custom key bindings

Custom key bindings¶

napari without gui_qt

napari without gui_qt¶

Add points

Add points¶

Points over time

Points over time¶

Add points with text

Add points with text¶

nD vectors

nD vectors¶

Add shapes with text

Add shapes with text¶

Add vectors color by angle

Add vectors color by angle¶

Mouse drag callback

Mouse drag callback¶

nD points with features

nD points with features¶

Tracks 3D with graph

Tracks 3D with graph¶

Volume plane rendering

Volume plane rendering¶

Tracks 2D

Tracks 2D¶

Add labels with features

Add labels with features¶

Update console

Update console¶

nD shapes

nD shapes¶

Dynamic projections dask

Dynamic projections dask¶

magicgui parameter sweep

magicgui parameter sweep¶

magicgui Image Arithmetic

magicgui Image Arithmetic¶

Affine transforms

Affine transforms¶

Cursor ray

Cursor ray¶

Interactive move rectangle

Interactive move rectangle¶

Add points on nD shapes

Add points on nD shapes¶

Add shapes with features

Add shapes with features¶

Add points with features

Add points with features¶

Tracks 3D

Tracks 3D¶

Add shapes

Add shapes¶

Shapes to labels

Shapes to labels¶

Interaction box points

Interaction box points¶

Custom mouse functions

Custom mouse functions¶

Interactive move point

Interactive move point¶

To screenshot

To screenshot¶

Annotate segmentation with text

Annotate segmentation with text¶

Action manager

Action manager¶

bbox annotator

bbox annotator¶

Gallery generated by Sphinx-Gallery

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